Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcpip1Q8CDG3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcpip1Q8CDG3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Gm44771-201ENSMUST00000206975 626 ntBASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcpip1Q8CDG3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.79■□□□□ 0.28
Vcpip1Q8CDG3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Gm18669-201ENSMUST00000216049 778 ntBASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcpip1Q8CDG3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcpip1Q8CDG3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms