Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Alx1Q8C8B0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Alx1Q8C8B0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Psmb5-202ENSMUST00000227257 622 ntBASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx1Q8C8B0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.19■□□□□ 0.5
Alx1Q8C8B0 AW822252-206ENSMUST00000208904 237 ntBASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx1Q8C8B0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.18■□□□□ 0.5
Alx1Q8C8B0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Gm7787-201ENSMUST00000216858 688 ntBASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.17■□□□□ 0.5
Alx1Q8C8B0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms