Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Uba3Q8C878 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.48■□□□□ 0.23
Uba3Q8C878 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Uba3Q8C878 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Uba3Q8C878 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Uba3Q8C878 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.47■□□□□ 0.23
Uba3Q8C878 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.47■□□□□ 0.23
Uba3Q8C878 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Uba3Q8C878 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Uba3Q8C878 Gm7461-201ENSMUST00000058918 827 ntBASIC16.47■□□□□ 0.23
Uba3Q8C878 Rps4l-201ENSMUST00000071745 943 ntBASIC16.47■□□□□ 0.23
Uba3Q8C878 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Uba3Q8C878 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Uba3Q8C878 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.46■□□□□ 0.23
Uba3Q8C878 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Uba3Q8C878 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.46■□□□□ 0.23
Uba3Q8C878 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Uba3Q8C878 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Uba3Q8C878 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Uba3Q8C878 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Uba3Q8C878 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Uba3Q8C878 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Uba3Q8C878 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Uba3Q8C878 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.45■□□□□ 0.22
Uba3Q8C878 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.45■□□□□ 0.22
Uba3Q8C878 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.45■□□□□ 0.22
Uba3Q8C878 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.45■□□□□ 0.22
Uba3Q8C878 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.45■□□□□ 0.22
Uba3Q8C878 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Uba3Q8C878 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Uba3Q8C878 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.44■□□□□ 0.22
Uba3Q8C878 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.44■□□□□ 0.22
Uba3Q8C878 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.44■□□□□ 0.22
Uba3Q8C878 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.44■□□□□ 0.22
Uba3Q8C878 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.44■□□□□ 0.22
Uba3Q8C878 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.44■□□□□ 0.22
Uba3Q8C878 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Uba3Q8C878 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.44■□□□□ 0.22
Uba3Q8C878 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Uba3Q8C878 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms