Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Gm6433-201ENSMUST00000118634 875 ntBASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Il3ra-202ENSMUST00000223589 738 ntBASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tsen54Q8C2A2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Gm7791-201ENSMUST00000219066 539 ntBASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tsen54Q8C2A2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Gm2274-201ENSMUST00000184539 609 ntBASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tsen54Q8C2A2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tsen54Q8C2A2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tsen54Q8C2A2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tsen54Q8C2A2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms