Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh3rf3Q8C120 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Gm15372-201ENSMUST00000120729 834 ntBASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh3rf3Q8C120 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.28■□□□□ 0.2
Sh3rf3Q8C120 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm8825-201ENSMUST00000182565 998 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm4518-201ENSMUST00000182638 718 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms