Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3rf2Q8BZT2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.82■□□□□ 0.12
Sh3rf2Q8BZT2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm23935-201ENSMUST00000102303 57 ntBASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm24270-201ENSMUST00000102326 57 ntBASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm24245-201ENSMUST00000157318 57 ntBASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Sh3rf2Q8BZT2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.8■□□□□ 0.12
Sh3rf2Q8BZT2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.79■□□□□ 0.12
Sh3rf2Q8BZT2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms