Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm11918-201ENSMUST00000121660 179 ntBASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm24694-201ENSMUST00000180054 110 ntBASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gm27663-201ENSMUST00000184839 110 ntBASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd9Q8BYH8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gm37466-201ENSMUST00000195692 652 ntBASIC12.24□□□□□ -0.45
Chd9Q8BYH8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd9Q8BYH8 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chd9Q8BYH8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Mir1982-201ENSMUST00000157368 74 ntBASIC12.22□□□□□ -0.45
Chd9Q8BYH8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Chd9Q8BYH8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms