Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Gm8344-201ENSMUST00000119813 856 ntBASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp43Q8BUM9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Birc2-201ENSMUST00000054878 378 ntBASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Gm10819-201ENSMUST00000099988 561 ntBASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp43Q8BUM9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp43Q8BUM9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp43Q8BUM9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms