Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpsf7Q8BTV2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cpsf7Q8BTV2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Mir6404-201ENSMUST00000183699 94 ntBASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf7Q8BTV2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Gm26039-201ENSMUST00000158152 144 ntBASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Gm6257-201ENSMUST00000163864 910 ntBASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Gm45058-201ENSMUST00000205810 766 ntBASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf7Q8BTV2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf7Q8BTV2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms