Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne3Q8BT60 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Gm6345-202ENSMUST00000180900 204 ntBASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne3Q8BT60 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Mir7071-201ENSMUST00000184847 69 ntBASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne3Q8BT60 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Gm11950-201ENSMUST00000121615 838 ntBASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cpne3Q8BT60 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms