Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ppp1r3eQ8BRJ4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm14859-201ENSMUST00000117752 357 ntBASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Efs-202ENSMUST00000227037 2540 ntBASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ppp1r3eQ8BRJ4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm9103-201ENSMUST00000119371 405 ntBASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.64□□□□□ -0.07
Ppp1r3eQ8BRJ4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm18101-201ENSMUST00000215769 548 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms