Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Asic1-205ENSMUST00000228185 1818 ntBASIC16.79■□□□□ 0.28
Nop53Q8BK35 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nop53Q8BK35 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop53Q8BK35 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.78■□□□□ 0.28
Nop53Q8BK35 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.78■□□□□ 0.28
Nop53Q8BK35 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Gm29518-201ENSMUST00000190858 372 ntBASIC16.78■□□□□ 0.28
Nop53Q8BK35 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop53Q8BK35 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Ank2-226ENSMUST00000189368 339 ntBASIC16.77■□□□□ 0.28
Nop53Q8BK35 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nop53Q8BK35 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.77■□□□□ 0.27
Nop53Q8BK35 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Nop53Q8BK35 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nop53Q8BK35 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.76■□□□□ 0.27
Nop53Q8BK35 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Mir770-201ENSMUST00000103252 94 ntBASIC16.76■□□□□ 0.27
Nop53Q8BK35 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Gm14859-201ENSMUST00000117752 357 ntBASIC16.76■□□□□ 0.27
Nop53Q8BK35 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Nop53Q8BK35 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms