Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc40Q8BI79 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.33■□□□□ 0.21
Ccdc40Q8BI79 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc40Q8BI79 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Gm15794-201ENSMUST00000120182 631 ntBASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc40Q8BI79 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc40Q8BI79 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms