Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf38Q8BI21 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf38Q8BI21 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Gm9013-201ENSMUST00000132939 882 ntBASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Gm23634-201ENSMUST00000175071 91 ntBASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf38Q8BI21 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Gm6345-202ENSMUST00000180900 204 ntBASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf38Q8BI21 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf38Q8BI21 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf38Q8BI21 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.08■□□□□ 0.01
Rnf38Q8BI21 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms