Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim23Q8BGX0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim23Q8BGX0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim23Q8BGX0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm7222-201ENSMUST00000117512 906 ntBASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm12350-201ENSMUST00000121208 462 ntBASIC15.08■□□□□ 0
Trim23Q8BGX0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm6550-201ENSMUST00000187574 993 ntBASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm2651-201ENSMUST00000203560 838 ntBASIC15.08■□□□□ 0
Trim23Q8BGX0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim23Q8BGX0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.08■□□□□ 0
Trim23Q8BGX0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim23Q8BGX0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.08■□□□□ 0
Trim23Q8BGX0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim23Q8BGX0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim23Q8BGX0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.07■□□□□ 0
Trim23Q8BGX0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim23Q8BGX0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.07■□□□□ 0
Trim23Q8BGX0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.07■□□□□ 0
Trim23Q8BGX0 Mir5131-201ENSMUST00000175426 93 ntBASIC15.07■□□□□ 0
Trim23Q8BGX0 Mir5126-201ENSMUST00000175513 77 ntBASIC15.07■□□□□ 0
Trim23Q8BGX0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 AV026068-213ENSMUST00000223675 1171 ntBASIC15.07■□□□□ 0
Trim23Q8BGX0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trim23Q8BGX0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.07■□□□□ 0
Trim23Q8BGX0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim23Q8BGX0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trim23Q8BGX0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Gm11764-201ENSMUST00000120221 623 ntBASIC15.06■□□□□ 0
Trim23Q8BGX0 Gm15173-201ENSMUST00000122049 433 ntBASIC15.06■□□□□ 0
Trim23Q8BGX0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.06■□□□□ 0
Trim23Q8BGX0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.06■□□□□ 0
Trim23Q8BGX0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.06■□□□□ 0
Trim23Q8BGX0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim23Q8BGX0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim23Q8BGX0 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms