Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Gm7230-201ENSMUST00000173026 815 ntBASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Gm15590-201ENSMUST00000078419 552 ntBASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2af1l4Q8BGJ9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2af1l4Q8BGJ9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
U2af1l4Q8BGJ9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1l4Q8BGJ9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
U2af1l4Q8BGJ9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2af1l4Q8BGJ9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Gm25990-201ENSMUST00000102440 86 ntBASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2af1l4Q8BGJ9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Gm15173-201ENSMUST00000122049 433 ntBASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
U2af1l4Q8BGJ9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms