Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Samm50Q8BGH2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.34■□□□□ 0.53
Samm50Q8BGH2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Samm50Q8BGH2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Samm50Q8BGH2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Gm17971-201ENSMUST00000190239 806 ntBASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Samm50Q8BGH2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Samm50Q8BGH2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.31■□□□□ 0.52
Samm50Q8BGH2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms