Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim6Q8BGE7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim6Q8BGE7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim6Q8BGE7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim6Q8BGE7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 BC037039-201ENSMUST00000192003 2205 ntBASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim6Q8BGE7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.63■□□□□ 0.25
Trim6Q8BGE7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.62■□□□□ 0.25
Trim6Q8BGE7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim6Q8BGE7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Gm13559-201ENSMUST00000120476 863 ntBASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim6Q8BGE7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms