Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bQ80YF6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Gm27389-201ENSMUST00000183622 195 ntBASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bQ80YF6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gm37722-201ENSMUST00000193757 208 ntBASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gm45058-201ENSMUST00000205810 766 ntBASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 BC037039-201ENSMUST00000192003 2205 ntBASIC13.23□□□□□ -0.29
Upk3bQ80YF6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bQ80YF6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms