Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnrc18Q80WC3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm11543-201ENSMUST00000120758 370 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm6218-201ENSMUST00000219812 628 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm11478-201ENSMUST00000117851 599 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm15483-201ENSMUST00000120338 456 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Gm6007-201ENSMUST00000208170 823 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnrc18Q80WC3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tnrc18Q80WC3 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.36■□□□□ 0.05
Tnrc18Q80WC3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tnrc18Q80WC3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.34■□□□□ 0.05
Tnrc18Q80WC3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms