Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh19Q80TF3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Gm15467-201ENSMUST00000120582 445 ntBASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh19Q80TF3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Gm44487-201ENSMUST00000205145 325 ntBASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh19Q80TF3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm5682-201ENSMUST00000173402 505 ntBASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm37935-201ENSMUST00000192012 982 ntBASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdh19Q80TF3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms