Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpap1Q80TE0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Gm2810-201ENSMUST00000118681 990 ntBASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Rpap1Q80TE0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpap1Q80TE0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Gm18737-201ENSMUST00000173594 937 ntBASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rpap1Q80TE0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Gm17837-201ENSMUST00000186435 985 ntBASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpap1Q80TE0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Rpap1Q80TE0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Gm28265-201ENSMUST00000188201 2319 ntBASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpap1Q80TE0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rpap1Q80TE0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Rpap1Q80TE0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rpap1Q80TE0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Rpap1Q80TE0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Rpap1Q80TE0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rpap1Q80TE0 Gm16026-204ENSMUST00000162652 683 ntBASIC24■■□□□ 1.43
Rpap1Q80TE0 Gm29541-201ENSMUST00000191351 678 ntBASIC24■■□□□ 1.43
Rpap1Q80TE0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rpap1Q80TE0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Gm45293-201ENSMUST00000209754 1812 ntBASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Gm13823-201ENSMUST00000119930 345 ntBASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpap1Q80TE0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Rpap1Q80TE0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms