Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.26■□□□□ 0.51
Nup98Q6PFD9 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Mir449b-201ENSMUST00000104833 80 ntBASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Gm2810-201ENSMUST00000118681 990 ntBASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nup98Q6PFD9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Gm25287-201ENSMUST00000103846 110 ntBASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Gm22918-201ENSMUST00000103855 110 ntBASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.24■□□□□ 0.51
Nup98Q6PFD9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.24■□□□□ 0.51
Nup98Q6PFD9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nup98Q6PFD9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Gm29541-201ENSMUST00000191351 678 ntBASIC18.22■□□□□ 0.51
Nup98Q6PFD9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms