Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm45384-201ENSMUST00000210451 277 ntBASIC16.77■□□□□ 0.28
ShbQ6PD21 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShbQ6PD21 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShbQ6PD21 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShbQ6PD21 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShbQ6PD21 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ShbQ6PD21 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ShbQ6PD21 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ShbQ6PD21 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.76■□□□□ 0.27
ShbQ6PD21 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.76■□□□□ 0.27
ShbQ6PD21 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
ShbQ6PD21 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.76■□□□□ 0.27
ShbQ6PD21 Gm27920-201ENSMUST00000183953 96 ntBASIC16.76■□□□□ 0.27
ShbQ6PD21 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.76■□□□□ 0.27
ShbQ6PD21 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ShbQ6PD21 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShbQ6PD21 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Gm11478-201ENSMUST00000117851 599 ntBASIC16.75■□□□□ 0.27
ShbQ6PD21 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Gm8515-201ENSMUST00000194852 576 ntBASIC16.75■□□□□ 0.27
ShbQ6PD21 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ShbQ6PD21 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShbQ6PD21 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
ShbQ6PD21 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ShbQ6PD21 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.74■□□□□ 0.27
ShbQ6PD21 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.74■□□□□ 0.27
ShbQ6PD21 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.74■□□□□ 0.27
ShbQ6PD21 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Gm9899-201ENSMUST00000065519 555 ntBASIC16.74■□□□□ 0.27
ShbQ6PD21 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ShbQ6PD21 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.74■□□□□ 0.27
ShbQ6PD21 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.74■□□□□ 0.27
ShbQ6PD21 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ShbQ6PD21 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.74■□□□□ 0.27
ShbQ6PD21 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShbQ6PD21 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ShbQ6PD21 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.73■□□□□ 0.27
ShbQ6PD21 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.73■□□□□ 0.27
ShbQ6PD21 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ShbQ6PD21 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.73■□□□□ 0.27
ShbQ6PD21 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShbQ6PD21 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShbQ6PD21 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShbQ6PD21 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShbQ6PD21 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.73■□□□□ 0.27
ShbQ6PD21 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.73■□□□□ 0.27
ShbQ6PD21 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.72■□□□□ 0.27
ShbQ6PD21 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ShbQ6PD21 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms