Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rtl3Q6P1Y1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Gm15173-201ENSMUST00000122049 433 ntBASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtl3Q6P1Y1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtl3Q6P1Y1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Gm8344-201ENSMUST00000119813 856 ntBASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtl3Q6P1Y1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtl3Q6P1Y1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtl3Q6P1Y1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms