Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Gm14928-201ENSMUST00000120198 477 ntBASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Knl1Q66JQ7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Gm8096-201ENSMUST00000209921 1591 ntBASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Knl1Q66JQ7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Gm44719-201ENSMUST00000206404 149 ntBASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Knl1Q66JQ7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Gm12138-201ENSMUST00000122180 951 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Mir7085-201ENSMUST00000184353 66 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Gm29667-201ENSMUST00000190817 490 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Gm8515-201ENSMUST00000194852 576 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Gm6180-201ENSMUST00000065243 498 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Asic1-205ENSMUST00000228185 1818 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Knl1Q66JQ7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Knl1Q66JQ7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Knl1Q66JQ7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Knl1Q66JQ7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Knl1Q66JQ7 Gm45059-201ENSMUST00000205558 1077 ntBASIC21.77■■□□□ 1.07
Knl1Q66JQ7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC21.77■■□□□ 1.07
Knl1Q66JQ7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.76■■□□□ 1.07
Knl1Q66JQ7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.76■■□□□ 1.07
Knl1Q66JQ7 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Gm13233-201ENSMUST00000118760 1443 ntBASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Gm13244-201ENSMUST00000118855 1446 ntBASIC21.75■■□□□ 1.07
Knl1Q66JQ7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Gm44729-201ENSMUST00000206759 2052 ntBASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC21.75■■□□□ 1.07
Knl1Q66JQ7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Knl1Q66JQ7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms