Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col11a2Q64739 Gm12859-201ENSMUST00000117834 427 ntBASIC18.73■□□□□ 0.59
Col11a2Q64739 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Col11a2Q64739 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col11a2Q64739 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col11a2Q64739 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col11a2Q64739 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.72■□□□□ 0.59
Col11a2Q64739 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Col11a2Q64739 Gm43433-201ENSMUST00000196573 481 ntBASIC18.72■□□□□ 0.59
Col11a2Q64739 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Rarb-207ENSMUST00000225921 2756 ntBASIC18.72■□□□□ 0.59
Col11a2Q64739 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.72■□□□□ 0.59
Col11a2Q64739 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col11a2Q64739 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm24543-201ENSMUST00000103867 82 ntBASIC18.71■□□□□ 0.59
Col11a2Q64739 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm9719-201ENSMUST00000162765 543 ntBASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm29667-201ENSMUST00000190817 490 ntBASIC18.71■□□□□ 0.59
Col11a2Q64739 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.71■□□□□ 0.59
Col11a2Q64739 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.71■□□□□ 0.59
Col11a2Q64739 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Col11a2Q64739 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.71■□□□□ 0.59
Col11a2Q64739 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Gm14928-201ENSMUST00000120198 477 ntBASIC18.71■□□□□ 0.59
Col11a2Q64739 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col11a2Q64739 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Col11a2Q64739 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.7■□□□□ 0.58
Col11a2Q64739 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Gm27838-201ENSMUST00000184829 128 ntBASIC18.7■□□□□ 0.58
Col11a2Q64739 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col11a2Q64739 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Col11a2Q64739 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Col11a2Q64739 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.69■□□□□ 0.58
Col11a2Q64739 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.69■□□□□ 0.58
Col11a2Q64739 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.69■□□□□ 0.58
Col11a2Q64739 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.69■□□□□ 0.58
Col11a2Q64739 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.69■□□□□ 0.58
Col11a2Q64739 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col11a2Q64739 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.69■□□□□ 0.58
Col11a2Q64739 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col11a2Q64739 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col11a2Q64739 Gm25857-201ENSMUST00000082788 129 ntBASIC18.68■□□□□ 0.58
Col11a2Q64739 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col11a2Q64739 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col11a2Q64739 Gm14042-201ENSMUST00000120139 833 ntBASIC18.67■□□□□ 0.58
Col11a2Q64739 Gm8515-201ENSMUST00000194852 576 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms