Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Six3Q62233 Gm13312-201ENSMUST00000119631 718 ntBASIC15.3■□□□□ 0.04
Six3Q62233 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Six3Q62233 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.3■□□□□ 0.04
Six3Q62233 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Six3Q62233 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.3■□□□□ 0.04
Six3Q62233 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Six3Q62233 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Six3Q62233 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.29■□□□□ 0.04
Six3Q62233 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Six3Q62233 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Six3Q62233 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.29■□□□□ 0.04
Six3Q62233 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Six3Q62233 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Six3Q62233 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.29■□□□□ 0.04
Six3Q62233 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.28■□□□□ 0.04
Six3Q62233 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Gm13836-201ENSMUST00000121159 501 ntBASIC15.28■□□□□ 0.04
Six3Q62233 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.28■□□□□ 0.04
Six3Q62233 Gm25406-201ENSMUST00000157599 105 ntBASIC15.28■□□□□ 0.04
Six3Q62233 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Six3Q62233 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Six3Q62233 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.28■□□□□ 0.04
Six3Q62233 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Six3Q62233 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.27■□□□□ 0.04
Six3Q62233 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Six3Q62233 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Six3Q62233 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.27■□□□□ 0.04
Six3Q62233 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.27■□□□□ 0.04
Six3Q62233 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.27■□□□□ 0.04
Six3Q62233 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
Six3Q62233 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Six3Q62233 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Six3Q62233 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms