Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.55■□□□□ 0.4
Sycp1Q62209 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sycp1Q62209 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sycp1Q62209 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.55■□□□□ 0.4
Sycp1Q62209 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sycp1Q62209 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sycp1Q62209 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sycp1Q62209 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.54■□□□□ 0.4
Sycp1Q62209 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.54■□□□□ 0.4
Sycp1Q62209 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sycp1Q62209 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.54■□□□□ 0.4
Sycp1Q62209 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.54■□□□□ 0.4
Sycp1Q62209 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.54■□□□□ 0.4
Sycp1Q62209 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.54■□□□□ 0.4
Sycp1Q62209 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sycp1Q62209 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.54■□□□□ 0.4
Sycp1Q62209 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Gm15165-201ENSMUST00000118140 502 ntBASIC17.53■□□□□ 0.4
Sycp1Q62209 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.53■□□□□ 0.4
Sycp1Q62209 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.53■□□□□ 0.4
Sycp1Q62209 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.53■□□□□ 0.4
Sycp1Q62209 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sycp1Q62209 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.52■□□□□ 0.4
Sycp1Q62209 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.52■□□□□ 0.4
Sycp1Q62209 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.52■□□□□ 0.4
Sycp1Q62209 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sycp1Q62209 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sycp1Q62209 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.52■□□□□ 0.4
Sycp1Q62209 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.52■□□□□ 0.4
Sycp1Q62209 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sycp1Q62209 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.52■□□□□ 0.4
Sycp1Q62209 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sycp1Q62209 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sycp1Q62209 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sycp1Q62209 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sycp1Q62209 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sycp1Q62209 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms