Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scn9aQ62205 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Scn9aQ62205 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn9aQ62205 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn9aQ62205 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scn9aQ62205 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn9aQ62205 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm25144-201ENSMUST00000179561 110 ntBASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm25352-201ENSMUST00000179815 110 ntBASIC18.22■□□□□ 0.51
Scn9aQ62205 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.22■□□□□ 0.51
Scn9aQ62205 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn9aQ62205 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn9aQ62205 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Scn9aQ62205 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.21■□□□□ 0.51
Scn9aQ62205 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scn9aQ62205 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scn9aQ62205 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Scn9aQ62205 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn9aQ62205 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.21■□□□□ 0.51
Scn9aQ62205 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn9aQ62205 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Scn9aQ62205 Gm15487-201ENSMUST00000122373 465 ntBASIC18.21■□□□□ 0.5
Scn9aQ62205 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.21■□□□□ 0.5
Scn9aQ62205 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
Scn9aQ62205 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.21■□□□□ 0.5
Scn9aQ62205 Gm9824-201ENSMUST00000178707 561 ntBASIC18.21■□□□□ 0.5
Scn9aQ62205 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Scn9aQ62205 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.21■□□□□ 0.5
Scn9aQ62205 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn9aQ62205 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn9aQ62205 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.2■□□□□ 0.5
Scn9aQ62205 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Scn9aQ62205 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn9aQ62205 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scn9aQ62205 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Scn9aQ62205 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.2■□□□□ 0.5
Scn9aQ62205 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.2■□□□□ 0.5
Scn9aQ62205 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn9aQ62205 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn9aQ62205 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm8410-201ENSMUST00000117225 605 ntBASIC18.19■□□□□ 0.5
Scn9aQ62205 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm11543-201ENSMUST00000120758 370 ntBASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn9aQ62205 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm16215-201ENSMUST00000161990 637 ntBASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scn9aQ62205 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn9aQ62205 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms