Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sema3bQ62177 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sema3bQ62177 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sema3bQ62177 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.87□□□□□ -0.03
Sema3bQ62177 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.87□□□□□ -0.03
Sema3bQ62177 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.87□□□□□ -0.03
Sema3bQ62177 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sema3bQ62177 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.87□□□□□ -0.03
Sema3bQ62177 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sema3bQ62177 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sema3bQ62177 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.87□□□□□ -0.03
Sema3bQ62177 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Sema3bQ62177 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gm11764-201ENSMUST00000120221 623 ntBASIC14.86□□□□□ -0.03
Sema3bQ62177 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gm44872-201ENSMUST00000207864 420 ntBASIC14.86□□□□□ -0.03
Sema3bQ62177 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gm5186-201ENSMUST00000218781 920 ntBASIC14.86□□□□□ -0.03
Sema3bQ62177 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.86□□□□□ -0.03
Sema3bQ62177 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.86□□□□□ -0.03
Sema3bQ62177 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sema3bQ62177 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.86□□□□□ -0.03
Sema3bQ62177 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.86□□□□□ -0.03
Sema3bQ62177 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Sema3bQ62177 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sema3bQ62177 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sema3bQ62177 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.85□□□□□ -0.03
Sema3bQ62177 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.85□□□□□ -0.03
Sema3bQ62177 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.85□□□□□ -0.03
Sema3bQ62177 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.85□□□□□ -0.03
Sema3bQ62177 Gm25406-201ENSMUST00000157599 105 ntBASIC14.85□□□□□ -0.03
Sema3bQ62177 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.85□□□□□ -0.03
Sema3bQ62177 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Sema3bQ62177 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sema3bQ62177 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.84□□□□□ -0.03
Sema3bQ62177 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sema3bQ62177 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms