Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
VcanQ62059 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.55□□□□□ -0.08
VcanQ62059 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.55□□□□□ -0.08
VcanQ62059 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Gm13015-201ENSMUST00000118674 204 ntBASIC14.55□□□□□ -0.08
VcanQ62059 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.55□□□□□ -0.08
VcanQ62059 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VcanQ62059 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VcanQ62059 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.55□□□□□ -0.08
VcanQ62059 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.54□□□□□ -0.08
VcanQ62059 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.54□□□□□ -0.08
VcanQ62059 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VcanQ62059 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm4518-201ENSMUST00000182638 718 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.54□□□□□ -0.08
VcanQ62059 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VcanQ62059 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VcanQ62059 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.54□□□□□ -0.08
VcanQ62059 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.54□□□□□ -0.08
VcanQ62059 Gm29667-201ENSMUST00000190817 490 ntBASIC14.54□□□□□ -0.08
VcanQ62059 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.54□□□□□ -0.08
VcanQ62059 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.54□□□□□ -0.08
VcanQ62059 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VcanQ62059 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VcanQ62059 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VcanQ62059 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.54□□□□□ -0.08
VcanQ62059 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.53□□□□□ -0.08
VcanQ62059 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VcanQ62059 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.53□□□□□ -0.08
VcanQ62059 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VcanQ62059 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VcanQ62059 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gm18766-201ENSMUST00000189811 808 ntBASIC14.53□□□□□ -0.08
VcanQ62059 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.53□□□□□ -0.08
VcanQ62059 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.53□□□□□ -0.08
VcanQ62059 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VcanQ62059 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VcanQ62059 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VcanQ62059 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.53□□□□□ -0.08
VcanQ62059 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VcanQ62059 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
VcanQ62059 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VcanQ62059 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms