Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.27■□□□□ 0.2
Smarcd1Q61466 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.27■□□□□ 0.2
Smarcd1Q61466 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd1Q61466 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Smarcd1Q61466 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.27■□□□□ 0.19
Smarcd1Q61466 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcd1Q61466 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcd1Q61466 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcd1Q61466 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcd1Q61466 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.26■□□□□ 0.19
Smarcd1Q61466 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.26■□□□□ 0.19
Smarcd1Q61466 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Gm5364-201ENSMUST00000216789 889 ntBASIC16.26■□□□□ 0.19
Smarcd1Q61466 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.26■□□□□ 0.19
Smarcd1Q61466 Psmb5-202ENSMUST00000227257 622 ntBASIC16.26■□□□□ 0.19
Smarcd1Q61466 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd1Q61466 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.25■□□□□ 0.19
Smarcd1Q61466 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.25■□□□□ 0.19
Smarcd1Q61466 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.25■□□□□ 0.19
Smarcd1Q61466 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd1Q61466 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.25■□□□□ 0.19
Smarcd1Q61466 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm14722-201ENSMUST00000118943 689 ntBASIC16.24■□□□□ 0.19
Smarcd1Q61466 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm9682-201ENSMUST00000197505 556 ntBASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gm45167-201ENSMUST00000208007 322 ntBASIC16.24■□□□□ 0.19
Smarcd1Q61466 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcd1Q61466 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd1Q61466 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms