Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccne1Q61457 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccne1Q61457 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccne1Q61457 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccne1Q61457 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Mir6990-201ENSMUST00000183724 91 ntBASIC20.24■□□□□ 0.83
Ccne1Q61457 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccne1Q61457 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccne1Q61457 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gm10499-201ENSMUST00000174094 934 ntBASIC20.23■□□□□ 0.83
Ccne1Q61457 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.23■□□□□ 0.83
Ccne1Q61457 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gm43474-201ENSMUST00000196415 774 ntBASIC20.23■□□□□ 0.83
Ccne1Q61457 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.23■□□□□ 0.83
Ccne1Q61457 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccne1Q61457 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.23■□□□□ 0.83
Ccne1Q61457 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccne1Q61457 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.22■□□□□ 0.83
Ccne1Q61457 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccne1Q61457 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Ccne1Q61457 Gm18889-201ENSMUST00000174284 929 ntBASIC20.22■□□□□ 0.83
Ccne1Q61457 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccne1Q61457 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccne1Q61457 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccne1Q61457 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccne1Q61457 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccne1Q61457 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.22■□□□□ 0.83
Ccne1Q61457 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccne1Q61457 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccne1Q61457 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccne1Q61457 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccne1Q61457 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.21■□□□□ 0.83
Ccne1Q61457 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms