Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.44□□□□□ -0.1
Clcn4Q61418 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clcn4Q61418 Gm7153-201ENSMUST00000117092 455 ntBASIC14.44□□□□□ -0.1
Clcn4Q61418 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Clcn4Q61418 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Gm27742-201ENSMUST00000184667 60 ntBASIC14.44□□□□□ -0.1
Clcn4Q61418 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Clcn4Q61418 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Clcn4Q61418 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Clcn4Q61418 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clcn4Q61418 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Gm44430-201ENSMUST00000203376 995 ntBASIC14.43□□□□□ -0.1
Clcn4Q61418 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.43□□□□□ -0.1
Clcn4Q61418 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
Clcn4Q61418 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clcn4Q61418 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn4Q61418 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.42□□□□□ -0.1
Clcn4Q61418 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Gm27357-201ENSMUST00000183754 135 ntBASIC14.42□□□□□ -0.1
Clcn4Q61418 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.42□□□□□ -0.1
Clcn4Q61418 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn4Q61418 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn4Q61418 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.41□□□□□ -0.1
Clcn4Q61418 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clcn4Q61418 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clcn4Q61418 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Clcn4Q61418 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clcn4Q61418 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn4Q61418 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms