Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scarb1Q61009 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scarb1Q61009 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scarb1Q61009 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scarb1Q61009 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scarb1Q61009 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.22□□□□□ -0.29
Scarb1Q61009 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.22□□□□□ -0.29
Scarb1Q61009 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.22□□□□□ -0.29
Scarb1Q61009 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.22□□□□□ -0.29
Scarb1Q61009 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.22□□□□□ -0.29
Scarb1Q61009 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.22□□□□□ -0.29
Scarb1Q61009 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Scarb1Q61009 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scarb1Q61009 BC037039-201ENSMUST00000192003 2205 ntBASIC13.21□□□□□ -0.29
Scarb1Q61009 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.21□□□□□ -0.29
Scarb1Q61009 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Scarb1Q61009 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.21□□□□□ -0.29
Scarb1Q61009 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.21□□□□□ -0.29
Scarb1Q61009 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.21□□□□□ -0.29
Scarb1Q61009 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scarb1Q61009 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Scarb1Q61009 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scarb1Q61009 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Scarb1Q61009 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scarb1Q61009 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scarb1Q61009 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scarb1Q61009 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.2□□□□□ -0.3
Scarb1Q61009 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scarb1Q61009 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scarb1Q61009 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scarb1Q61009 Gm715-201ENSMUST00000117865 831 ntBASIC13.2□□□□□ -0.3
Scarb1Q61009 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.2□□□□□ -0.3
Scarb1Q61009 Gm20760-201ENSMUST00000179197 648 ntBASIC13.2□□□□□ -0.3
Scarb1Q61009 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scarb1Q61009 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scarb1Q61009 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scarb1Q61009 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Scarb1Q61009 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Scarb1Q61009 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scarb1Q61009 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scarb1Q61009 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scarb1Q61009 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scarb1Q61009 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.19□□□□□ -0.3
Scarb1Q61009 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.19□□□□□ -0.3
Scarb1Q61009 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms