Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gm1401-201ENSMUST00000122048 772 ntBASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps54Q5SPW0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps54Q5SPW0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Gm37153-201ENSMUST00000193637 231 ntBASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps54Q5SPW0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Gm27525-201ENSMUST00000184465 107 ntBASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Gm45167-201ENSMUST00000208007 322 ntBASIC18.71■□□□□ 0.59
Vps54Q5SPW0 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps54Q5SPW0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Gm18206-201ENSMUST00000207027 926 ntBASIC18.7■□□□□ 0.58
Vps54Q5SPW0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms