Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5d-4Q5R1F6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Rprl3-201ENSMUST00000157400 290 ntBASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.46□□□□□ -0.25
Trav5d-4Q5R1F6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5d-4Q5R1F6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5d-4Q5R1F6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav5d-4Q5R1F6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms