Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Gm13401-201ENSMUST00000117074 291 ntBASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-3Q5R1C3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-3Q5R1C3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-3Q5R1C3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav3-3Q5R1C3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav3-3Q5R1C3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Gm13158-201ENSMUST00000122007 736 ntBASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3-3Q5R1C3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Gm6576-201ENSMUST00000169678 883 ntBASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-3Q5R1C3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav3-3Q5R1C3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms