Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Rc3h1Q4VGL6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rc3h1Q4VGL6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Rc3h1Q4VGL6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rc3h1Q4VGL6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rc3h1Q4VGL6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.02■□□□□ 0.47
Rc3h1Q4VGL6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rc3h1Q4VGL6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Gm7787-201ENSMUST00000216858 688 ntBASIC18■□□□□ 0.47
Rc3h1Q4VGL6 AC174742.1-201ENSMUST00000218272 304 ntBASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rc3h1Q4VGL6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms