Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ddx49Q4FZF3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ddx49Q4FZF3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx49Q4FZF3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx49Q4FZF3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Gm27301-201ENSMUST00000184012 127 ntBASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.14■□□□□ 0.49
Ddx49Q4FZF3 Grk6-207ENSMUST00000225925 2769 ntBASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx49Q4FZF3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Gm25948-201ENSMUST00000175334 112 ntBASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx49Q4FZF3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms