Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Gm15372-201ENSMUST00000120729 834 ntBASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Gm12895-201ENSMUST00000122214 226 ntBASIC16.62■□□□□ 0.25
Syne3Q4FZC9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.61■□□□□ 0.25
Syne3Q4FZC9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Syne3Q4FZC9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syne3Q4FZC9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Gm15165-201ENSMUST00000118140 502 ntBASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syne3Q4FZC9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Syne3Q4FZC9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syne3Q4FZC9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms