Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Gm10175-201ENSMUST00000086013 645 ntBASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf38aQ4FK66 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Gm2756-201ENSMUST00000195851 400 ntBASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf38aQ4FK66 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Gm27702-201ENSMUST00000184512 56 ntBASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf38aQ4FK66 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms