Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc27Q3V036 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Gm10231-201ENSMUST00000181584 441 ntBASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Gm10175-202ENSMUST00000208752 441 ntBASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc27Q3V036 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.94■□□□□ 0.78
Ccdc27Q3V036 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc27Q3V036 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Sybu-209ENSMUST00000228639 4113 ntBASIC19.92■□□□□ 0.78
Ccdc27Q3V036 AC159649.2-201ENSMUST00000222984 3223 ntBASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms