Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Brf2Q3UAW9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Brf2Q3UAW9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Gm15165-201ENSMUST00000118140 502 ntBASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Brf2Q3UAW9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.72□□□□□ -0.05
Brf2Q3UAW9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brf2Q3UAW9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.71□□□□□ -0.05
Brf2Q3UAW9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms