Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lins1Q3U1D0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.56■□□□□ 0.56
Lins1Q3U1D0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lins1Q3U1D0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lins1Q3U1D0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lins1Q3U1D0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Gm6257-201ENSMUST00000163864 910 ntBASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.53■□□□□ 0.56
Lins1Q3U1D0 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.53■□□□□ 0.56
Lins1Q3U1D0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lins1Q3U1D0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms