Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim63Q38HM4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.95□□□□□ -0.34
Trim63Q38HM4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim63Q38HM4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim63Q38HM4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.93□□□□□ -0.34
Trim63Q38HM4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.93□□□□□ -0.34
Trim63Q38HM4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim63Q38HM4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms