Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm9899-201ENSMUST00000065519 555 ntBASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col19a1Q0VF58 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Gm11478-201ENSMUST00000117851 599 ntBASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Gm15483-201ENSMUST00000120338 456 ntBASIC16.58■□□□□ 0.24
Col19a1Q0VF58 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Col19a1Q0VF58 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm8318-201ENSMUST00000182954 872 ntBASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm18766-201ENSMUST00000189811 808 ntBASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm44344-201ENSMUST00000200287 129 ntBASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm18062-201ENSMUST00000208020 547 ntBASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm18055-201ENSMUST00000208254 547 ntBASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col19a1Q0VF58 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.56■□□□□ 0.24
Col19a1Q0VF58 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.55■□□□□ 0.24
Col19a1Q0VF58 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms