Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.03□□□□□ -0.32
Tff1Q08423 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.03□□□□□ -0.32
Tff1Q08423 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Gm5867-201ENSMUST00000063197 592 ntBASIC13.03□□□□□ -0.32
Tff1Q08423 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.03□□□□□ -0.32
Tff1Q08423 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tff1Q08423 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Tff1Q08423 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Tff1Q08423 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tff1Q08423 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tff1Q08423 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tff1Q08423 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.02□□□□□ -0.32
Tff1Q08423 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tff1Q08423 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Tff1Q08423 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tff1Q08423 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tff1Q08423 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.02□□□□□ -0.33
Tff1Q08423 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.02□□□□□ -0.33
Tff1Q08423 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tff1Q08423 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tff1Q08423 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.02□□□□□ -0.33
Tff1Q08423 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.02□□□□□ -0.33
Tff1Q08423 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tff1Q08423 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.01□□□□□ -0.33
Tff1Q08423 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.01□□□□□ -0.33
Tff1Q08423 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tff1Q08423 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Tff1Q08423 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Tff1Q08423 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tff1Q08423 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Gm43514-201ENSMUST00000198852 424 ntBASIC13.01□□□□□ -0.33
Tff1Q08423 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.01□□□□□ -0.33
Tff1Q08423 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tff1Q08423 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tff1Q08423 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Tff1Q08423 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.01□□□□□ -0.33
Tff1Q08423 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tff1Q08423 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Tff1Q08423 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13□□□□□ -0.33
Tff1Q08423 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tff1Q08423 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13□□□□□ -0.33
Tff1Q08423 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tff1Q08423 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13□□□□□ -0.33
Tff1Q08423 Gm6623-201ENSMUST00000173570 544 ntBASIC13□□□□□ -0.33
Tff1Q08423 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Tff1Q08423 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tff1Q08423 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tff1Q08423 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms