Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC23.82■■□□□ 1.4
Col17a1Q07563 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Col17a1Q07563 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.82■■□□□ 1.4
Col17a1Q07563 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col17a1Q07563 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm6244-201ENSMUST00000178732 841 ntBASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm8318-201ENSMUST00000182954 872 ntBASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm27572-201ENSMUST00000183702 255 ntBASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Mettl6-204ENSMUST00000227595 1027 ntBASIC23.81■■□□□ 1.4
Col17a1Q07563 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col17a1Q07563 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Col17a1Q07563 Gm24526-201ENSMUST00000082921 158 ntBASIC23.81■■□□□ 1.4
Col17a1Q07563 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Gm10327-201ENSMUST00000105222 1002 ntBASIC23.8■■□□□ 1.4
Col17a1Q07563 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
Col17a1Q07563 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC23.8■■□□□ 1.4
Col17a1Q07563 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Klk2-ps-201ENSMUST00000205342 571 ntBASIC23.8■■□□□ 1.4
Col17a1Q07563 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC23.8■■□□□ 1.4
Col17a1Q07563 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col17a1Q07563 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC23.79■■□□□ 1.4
Col17a1Q07563 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC23.79■■□□□ 1.4
Col17a1Q07563 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC23.79■■□□□ 1.4
Col17a1Q07563 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC23.79■■□□□ 1.4
Col17a1Q07563 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col17a1Q07563 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Gm7286-201ENSMUST00000182691 1007 ntBASIC23.78■■□□□ 1.4
Col17a1Q07563 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC23.78■■□□□ 1.4
Col17a1Q07563 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Col17a1Q07563 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col17a1Q07563 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Gm16476-201ENSMUST00000221544 139 ntBASIC23.77■■□□□ 1.4
Col17a1Q07563 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Col17a1Q07563 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC23.77■■□□□ 1.4
Col17a1Q07563 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col17a1Q07563 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Col17a1Q07563 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Col17a1Q07563 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Col17a1Q07563 Gm27731-201ENSMUST00000185192 107 ntBASIC23.76■■□□□ 1.39
Col17a1Q07563 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms